Index

_

__init__() (acq4.Manager.Manager method)

A

abort() (acq4.devices.MicroManagerStage.MicroManagerStage method) (acq4.devices.Scientifica.Scientifica method) advance() (acq4.devices.Pipette.Pipette method)

approachDepth() (acq4.devices.Pipette.Pipette method) averageHistoricOffset() (acq4.devices.Pipette.Pipette method) axes() (acq4.devices.NewScaleMPM.NewScaleMPM method) (acq4.devices.Scientifica.Scientifica method)

B

breakIn() (acq4.devices.PatchPipette.PatchPipette method)

C

cameraModuleInterface() (acq4.devices.Pipette.Pipette method) capabilities() (acq4.devices.MicroManagerStage.MicroManagerStage method) (acq4.devices.NewScaleMPM.NewScaleMPM method) (acq4.devices.Scientifica.Scientifica method) (acq4.devices.ThorlabsMFC1.ThorlabsMFC1 method) channelName() (acq4.devices.OdorDelivery.OdorDelivery method) checkRangeOfMotion() (acq4.devices.Pipette.Pipette method)

clampStateChanged() (acq4.devices.PatchPipette.PatchPipette method) cleanApproachHeight (acq4.devices.Pipette.Pipette property) clearSavedOffsets() (acq4.devices.Pipette.Pipette method) configure() (acq4.Manager.Manager method) createTask() (acq4.devices.FilterWheel.FilterWheel method) (acq4.devices.OdorDelivery.OdorDelivery method) (acq4.Manager.Manager method) currentDirChanged() (acq4.Manager.Manager method)

D

defaultMotionPlanners (acq4.devices.Pipette.Pipette attribute) defaultStateManagerClass (acq4.devices.PatchPipette.PatchPipette attribute) depthBelowSurface() (acq4.devices.Pipette.Pipette method) deviceInterface() (acq4.devices.FilterWheel.FilterWheel method) (acq4.devices.MicroManagerStage.MicroManagerStage method) (acq4.devices.OdorDelivery.OdorDelivery method) (acq4.devices.PatchPipette.PatchPipette method) (acq4.devices.Pipette.Pipette method) (acq4.devices.PressureControl.PressureControl method) (acq4.devices.Scientifica.Scientifica method) (acq4.devices.Sonicator.Sonicator method) (acq4.devices.ThorlabsMFC1.ThorlabsMFC1 method)

devices (acq4.devices.NewScaleMPM.NewScaleMPM attribute) dirHandle() (acq4.Manager.Manager method) doProtocol() (acq4.devices.Sonicator.Sonicator method)

E

emitFullTestPulseData() (acq4.devices.PatchPipette.PatchPipette method)

emitNewEvent() (acq4.devices.PatchPipette.PatchPipette method) exec_() (acq4.Manager.Manager method)

F

fileHandle() (acq4.Manager.Manager method) FilterWheel (class in acq4.devices.FilterWheel) findNewPipette() (acq4.devices.Pipette.Pipette method) finishPatchRecord() (acq4.devices.PatchPipette.PatchPipette method)

focusOnTarget() (acq4.devices.PatchPipette.PatchPipette method) focusOnTip() (acq4.devices.PatchPipette.PatchPipette method) focusTarget() (acq4.devices.Pipette.Pipette method) focusTip() (acq4.devices.Pipette.Pipette method)

G

getBaseDir() (acq4.Manager.Manager method) getBoundaries() (acq4.devices.Pipette.Pipette method) getBusyStatus() (acq4.devices.PressureControl.PressureControl method) getCleaningWell() (acq4.devices.Pipette.Pipette method) getCurrentDatabase() (acq4.Manager.Manager method) getCurrentDir() (acq4.Manager.Manager method) getDevice() (acq4.Manager.Manager method) getDirOfSelectedFile() (acq4.Manager.Manager method) getFilter() (acq4.devices.FilterWheel.FilterWheel method) getFilterDevice() (acq4.devices.PMT.PMT method) getGeometry() (acq4.devices.Pipette.Pipette method) getInterface() (acq4.Manager.Manager method) getModule() (acq4.Manager.Manager method) getParam() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) getParams() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) getPosition() (acq4.devices.FilterWheel.FilterWheel method)

getPositionCount() (acq4.devices.FilterWheel.FilterWheel method) getPressure() (acq4.devices.PressureControl.PressureControl method) getRecordingChambers() (acq4.devices.Pipette.Pipette method) getROI() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) getSource() (acq4.devices.PressureControl.PressureControl method) getSpeed() (acq4.devices.FilterWheel.FilterWheel method) getState() (acq4.devices.PatchPipette.PatchPipette method) getSwitch() (acq4.devices.Scientifica.Scientifica method) globalDirection() (acq4.devices.Pipette.Pipette method) globalPosition() (acq4.devices.Pipette.Pipette method) goAboveTarget() (acq4.devices.Pipette.Pipette method) goApproach() (acq4.devices.Pipette.Pipette method) goHome() (acq4.devices.PatchPipette.PatchPipette method) (acq4.devices.Pipette.Pipette method) goIdle() (acq4.devices.Pipette.Pipette method) goSearch() (acq4.devices.Pipette.Pipette method) goTarget() (acq4.devices.Pipette.Pipette method)

H

hardware configuration

hideMarkers() (acq4.devices.Pipette.Pipette method)

I

imagingDevice() (acq4.devices.PatchPipette.PatchPipette method) (acq4.devices.Pipette.Pipette method) isMoving() (acq4.devices.FilterWheel.FilterWheel method)

isRunning() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) isTipBroken() (acq4.devices.PatchPipette.PatchPipette method) isTipClean() (acq4.devices.PatchPipette.PatchPipette method) iterativelyFindTip() (acq4.devices.Pipette.Pipette method)

L

listConfigurations() (acq4.Manager.Manager method) listDefinedModules() (acq4.Manager.Manager method) listDevices() (acq4.Manager.Manager method) listFilters() (acq4.devices.FilterWheel.FilterWheel method) listModules() (acq4.Manager.Manager method) listParams() (acq4.devices.MicroManagerCamera.MicroManagerCamera method)

listStates() (acq4.devices.PatchPipette.PatchPipette method) loadDefinedModule() (acq4.Manager.Manager method) loadDevice() (acq4.Manager.Manager method) loadModule() (acq4.Manager.Manager method) loadPosition() (acq4.devices.Pipette.Pipette method) loadPreset() (acq4.devices.FilterWheel.FilterWheel method) localDirection() (acq4.devices.Pipette.Pipette method)

M

Manager (class in acq4.Manager) mfcPosChanged() (acq4.devices.ThorlabsMFC1.ThorlabsMFC1 method)

MicroManagerCamera (class in acq4.devices.MicroManagerCamera) MicroManagerStage (class in acq4.devices.MicroManagerStage) monitor() (acq4.devices.NewScaleMPM.NewScaleMPM method) moveTo() (acq4.devices.Pipette.Pipette method)

N

newCell() (acq4.devices.PatchPipette.PatchPipette method) newFrames() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) newPatchAttempt() (acq4.devices.PatchPipette.PatchPipette method)

newPipette() (acq4.devices.PatchPipette.PatchPipette method) newPipetteTipOffsetIsReasonable() (acq4.devices.Pipette.Pipette method) NewScaleMPM (class in acq4.devices.NewScaleMPM)

O

odorChannels() (acq4.devices.OdorDelivery.OdorDelivery method) OdorDelivery (class in acq4.devices.OdorDelivery) odorDetails() (acq4.devices.OdorDelivery.OdorDelivery method)

odors (acq4.devices.OdorDelivery.OdorDelivery attribute) odorsAsParameterLimits() (acq4.devices.OdorDelivery.OdorDelivery method) overrideTipOffsetHistory() (acq4.devices.Pipette.Pipette method)

P

PatchPipette (class in acq4.devices.PatchPipette) patchPipetteDevice (acq4.devices.Sonicator.Sonicator property) patchRecord() (acq4.devices.PatchPipette.PatchPipette method) pathGeneratorClass (acq4.devices.Pipette.Pipette attribute) Pipette (class in acq4.devices.Pipette) pipetteRecord() (acq4.devices.PatchPipette.PatchPipette method) pitchAngle() (acq4.devices.Pipette.Pipette method) pitchRadians() (acq4.devices.Pipette.Pipette method) PMT (class in acq4.devices.PMT)

positionAtDepth() (acq4.devices.Pipette.Pipette method) positionChanged() (acq4.devices.Pipette.Pipette method) positionChangeFinished() (acq4.devices.Pipette.Pipette method) positionUpdatesPerSecond (acq4.devices.MicroManagerStage.MicroManagerStage property) (acq4.devices.NewScaleMPM.NewScaleMPM property) (acq4.devices.Scientifica.Scientifica property) (acq4.devices.ThorlabsMFC1.ThorlabsMFC1 property) pressureChanged() (acq4.devices.PatchPipette.PatchPipette method) PressureControl (class in acq4.devices.PressureControl)

Q

quit() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) (acq4.devices.MicroManagerStage.MicroManagerStage method) (acq4.devices.NewScaleMPM.NewScaleMPM method) (acq4.devices.PatchPipette.PatchPipette method) (acq4.devices.Pipette.Pipette method) (acq4.devices.Scientifica.Scientifica method) (acq4.devices.ThorlabsMFC1.ThorlabsMFC1 method) (acq4.Manager.Manager method)

R

rampPressure() (acq4.devices.PressureControl.PressureControl method) readConfig() (acq4.Manager.Manager method) recordTipOffsetInHistory() (acq4.devices.Pipette.Pipette method) reloadAll() (acq4.Manager.Manager method) requestNewPipette() (acq4.devices.PatchPipette.PatchPipette method)

reserveDevices() (acq4.Manager.Manager method) resetGlobalPosition() (acq4.devices.Pipette.Pipette method) retractFromSurface() (acq4.devices.Pipette.Pipette method) runFromCommandLine() (acq4.Manager.Manager class method) runTask() (acq4.Manager.Manager method)

S

safeToSonicate() (acq4.devices.Sonicator.Sonicator method) saveCalibration() (acq4.devices.Pipette.Pipette method) saveManualTipPosition() (acq4.devices.Pipette.Pipette method) savePosition() (acq4.devices.Pipette.Pipette method) Scientifica (class in acq4.devices.Scientifica) scopeDevice() (acq4.devices.PatchPipette.PatchPipette method) (acq4.devices.Pipette.Pipette method) setActive() (acq4.devices.PatchPipette.PatchPipette method) setAllChannelsOff() (acq4.devices.OdorDelivery.OdorDelivery method) setBaseDir() (acq4.Manager.Manager method) setCell() (acq4.devices.PatchPipette.PatchPipette method) setChannelValue() (acq4.devices.OdorDelivery.OdorDelivery method) setCurrentDir() (acq4.Manager.Manager method) setHolding() (acq4.devices.ThorlabsMFC1.ThorlabsMFC1 method) setLogDir() (acq4.Manager.Manager method) setNewPipetteTipOffsetIfAcceptable() (acq4.devices.Pipette.Pipette method) setOffset() (acq4.devices.Pipette.Pipette method) setParam() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) setParams() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) setPosition() (acq4.devices.FilterWheel.FilterWheel method) setPressure() (acq4.devices.PressureControl.PressureControl method) setRoeEnabled() (acq4.devices.ThorlabsMFC1.ThorlabsMFC1 method) setROI() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) setSelected() (acq4.devices.PatchPipette.PatchPipette method) setSource() (acq4.devices.PressureControl.PressureControl method) setSpeed() (acq4.devices.FilterWheel.FilterWheel method) setState() (acq4.devices.PatchPipette.PatchPipette method) setTarget() (acq4.devices.Pipette.Pipette method) setTipBroken() (acq4.devices.PatchPipette.PatchPipette method) setTipClean() (acq4.devices.PatchPipette.PatchPipette method) setTipOffset() (acq4.devices.Pipette.Pipette method) setTipOffsetIfAcceptable() (acq4.devices.Pipette.Pipette method) setupCamera() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) setUserSpeed() (acq4.devices.MicroManagerStage.MicroManagerStage method) (acq4.devices.Scientifica.Scientifica method) setZero() (acq4.devices.ThorlabsMFC1.ThorlabsMFC1 method) showGUI() (acq4.Manager.Manager method) sigActiveChanged (acq4.devices.PatchPipette.PatchPipette attribute)

sigBusyChanged (acq4.devices.PressureControl.PressureControl attribute) sigCalibrationChanged (acq4.devices.Pipette.Pipette attribute) sigFilterChanged (acq4.devices.FilterWheel.FilterWheel attribute) sigFilterWheelSpeedChanged (acq4.devices.FilterWheel.FilterWheel attribute) sigMoveFinished (acq4.devices.PatchPipette.PatchPipette attribute) (acq4.devices.Pipette.Pipette attribute) sigMoveRequested (acq4.devices.Pipette.Pipette attribute) sigMoveStarted (acq4.devices.PatchPipette.PatchPipette attribute) (acq4.devices.Pipette.Pipette attribute) sigNewEvent (acq4.devices.PatchPipette.PatchPipette attribute) sigNewPipetteRequested (acq4.devices.PatchPipette.PatchPipette attribute) sigPatchAttemptFinished (acq4.devices.PatchPipette.PatchPipette attribute) sigPressureChanged (acq4.devices.PatchPipette.PatchPipette attribute) (acq4.devices.PressureControl.PressureControl attribute) sigSonicationChanged (acq4.devices.Sonicator.Sonicator attribute) sigStateChanged (acq4.devices.PatchPipette.PatchPipette attribute) sigTargetChanged (acq4.devices.PatchPipette.PatchPipette attribute) (acq4.devices.Pipette.Pipette attribute) sigTipBrokenChanged (acq4.devices.PatchPipette.PatchPipette attribute) sigTipCleanChanged (acq4.devices.PatchPipette.PatchPipette attribute) slotNames() (acq4.devices.FilterWheel.FilterWheel method) sonicationChanged() (acq4.devices.PatchPipette.PatchPipette method) Sonicator (class in acq4.devices.Sonicator) speedChanged() (acq4.devices.FilterWheel.FilterWheel method) startCamera() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) startMoving() (acq4.devices.MicroManagerStage.MicroManagerStage method) (acq4.devices.Scientifica.Scientifica method) startRecording() (acq4.devices.Pipette.Pipette method) stateManager() (acq4.devices.PatchPipette.PatchPipette method) stepwiseAdvance() (acq4.devices.Pipette.Pipette method) stop() (acq4.devices.FilterWheel.FilterWheel method) (acq4.devices.MicroManagerStage.MicroManagerStage method) (acq4.devices.NewScaleMPM.NewScaleMPM method) (acq4.devices.Pipette.Pipette method) (acq4.devices.Scientifica.Scientifica method) (acq4.devices.ThorlabsMFC1.ThorlabsMFC1 method) stopCamera() (acq4.devices.MicroManagerCamera.MicroManagerCamera method) suggestedDirFields() (acq4.Manager.Manager method)

T

targetPosition() (acq4.devices.MicroManagerStage.MicroManagerStage method) (acq4.devices.Pipette.Pipette method) (acq4.devices.Scientifica.Scientifica method) (acq4.devices.ThorlabsMFC1.ThorlabsMFC1 method)

taskInterface() (acq4.devices.FilterWheel.FilterWheel method) (acq4.devices.OdorDelivery.OdorDelivery method) ThorlabsMFC1 (class in acq4.devices.ThorlabsMFC1) tipOffsetIsReasonable() (acq4.devices.Pipette.Pipette method)

W

wiggle() (acq4.devices.Pipette.Pipette method)

writeConfigFile() (acq4.Manager.Manager method)

Y

yawAngle() (acq4.devices.Pipette.Pipette method)

yawRadians() (acq4.devices.Pipette.Pipette method)